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raw sanger sequencing data  (Mendeley Ltd)

 
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    Mendeley Ltd raw sanger sequencing data
    Raw Sanger Sequencing Data, supplied by Mendeley Ltd, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/raw sanger sequencing data/product/Mendeley Ltd
    Average 86 stars, based on 1 article reviews
    raw sanger sequencing data - by Bioz Stars, 2026-05
    86/100 stars

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    The format conversion workflow of ClinQC. ClinQC takes raw reads in any native file format of their sequencing platforms and returns a unified FASTQ files with Sanger (PHRED) quality encoding

    Journal: BMC Bioinformatics

    Article Title: ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research

    doi: 10.1186/s12859-016-0915-y

    Figure Lengend Snippet: The format conversion workflow of ClinQC. ClinQC takes raw reads in any native file format of their sequencing platforms and returns a unified FASTQ files with Sanger (PHRED) quality encoding

    Article Snippet: We have developed ClinQC, a flexible and user-friendly pipeline for format conversion, quality control, trimming and filtering of raw sequencing data generated from Sanger sequencing and three NGS sequencing platforms including Illumina, 454 and Ion Torrent.

    Techniques: Sequencing

    ClinQC final output. a QC summary table generated for each run, which includes experimental, patient, sequencing and QC information, one row for each sample/patient, ( b ) QC report generated by FASTQC before ( left ) and after ( right ) quality control for each sample/patient and linked in summary table, ( c ) FASTQ files with high quality reads for each sample/patient and linked in summary table

    Journal: BMC Bioinformatics

    Article Title: ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research

    doi: 10.1186/s12859-016-0915-y

    Figure Lengend Snippet: ClinQC final output. a QC summary table generated for each run, which includes experimental, patient, sequencing and QC information, one row for each sample/patient, ( b ) QC report generated by FASTQC before ( left ) and after ( right ) quality control for each sample/patient and linked in summary table, ( c ) FASTQ files with high quality reads for each sample/patient and linked in summary table

    Article Snippet: We have developed ClinQC, a flexible and user-friendly pipeline for format conversion, quality control, trimming and filtering of raw sequencing data generated from Sanger sequencing and three NGS sequencing platforms including Illumina, 454 and Ion Torrent.

    Techniques: Generated, Sequencing, Control

    Benchmark of ClinQC with Sanger sequencing trace files. We used 1000 trace files in AB1 format. The read lengths were ranging between 400 and 1000 base pairs. We randomly sampled 1000 files in multiple test data sets ranging from 10 files to 1000 files. The execution time is measured in minutes

    Journal: BMC Bioinformatics

    Article Title: ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research

    doi: 10.1186/s12859-016-0915-y

    Figure Lengend Snippet: Benchmark of ClinQC with Sanger sequencing trace files. We used 1000 trace files in AB1 format. The read lengths were ranging between 400 and 1000 base pairs. We randomly sampled 1000 files in multiple test data sets ranging from 10 files to 1000 files. The execution time is measured in minutes

    Article Snippet: We have developed ClinQC, a flexible and user-friendly pipeline for format conversion, quality control, trimming and filtering of raw sequencing data generated from Sanger sequencing and three NGS sequencing platforms including Illumina, 454 and Ion Torrent.

    Techniques: Sequencing

    Comparison of various features between ClinQC and QC tools

    Journal: BMC Bioinformatics

    Article Title: ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research

    doi: 10.1186/s12859-016-0915-y

    Figure Lengend Snippet: Comparison of various features between ClinQC and QC tools

    Article Snippet: We have developed ClinQC, a flexible and user-friendly pipeline for format conversion, quality control, trimming and filtering of raw sequencing data generated from Sanger sequencing and three NGS sequencing platforms including Illumina, 454 and Ion Torrent.

    Techniques: Comparison, Sequencing

    Comparison of various features between ClinQC and QC tools

    Journal: BMC Bioinformatics

    Article Title: ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research

    doi: 10.1186/s12859-016-0915-y

    Figure Lengend Snippet: Comparison of various features between ClinQC and QC tools

    Article Snippet: We have developed ClinQC, a flexible and user-friendly pipeline for format conversion, quality control, trimming and filtering of raw sequencing data generated from Sanger sequencing and three NGS sequencing platforms including Illumina, 454 and Ion Torrent.

    Techniques: Sequencing